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  • Negative cofitness for PS417_16785 from Pseudomonas simiae WCS417

    ABC transporter permease
    SEED: Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1)
    KEGG: branched-chain amino acid transport system permease protein

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_15690 ribonucleoside-triphosphate reductase -0.24
    2 PS417_23345 amino acid ABC transporter substrate-binding protein -0.21
    3 PS417_07500 hypothetical protein -0.21
    4 PS417_15390 hypothetical protein -0.21
    5 PS417_07380 hypothetical protein -0.20
    6 PS417_20840 hypothetical protein -0.20
    7 PS417_10205 hypothetical protein -0.19
    8 PS417_07735 cephalosporin hydroxylase -0.19
    9 PS417_18090 iron ABC transporter -0.19
    10 PS417_19400 amino acid transporter LysE -0.19
    11 PS417_19505 2,4-diaminobutyrate 4-aminotransferase -0.19
    12 PS417_10365 AraC family transcriptional regulator -0.18
    13 PS417_08420 lipoprotein -0.18
    14 PS417_21135 Asp/Glu/hydantoin racemase -0.18
    15 PS417_11440 hypothetical protein -0.18
    16 PS417_15540 NUDIX hydrolase -0.18
    17 PS417_10655 LuxR family transcriptional regulator -0.18
    18 PS417_26655 chemotaxis protein -0.18
    19 PS417_15710 nitrate reductase -0.17
    20 PS417_26710 membrane protein -0.17

    Or look for positive cofitness