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  • Negative cofitness for GFF3261 from Variovorax sp. SCN45

    FIG003003: hypothetical protein
    SEED: FIG003003: hypothetical protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3825 Autolysin sensor kinase (EC 2.7.3.-) -0.73
    2 GFF4485 FIG00715336: hypothetical protein -0.72
    3 GFF2379 Serine/threonine protein kinase -0.71
    4 GFF5490 Uncharacterized protein with LysM domain, COG1652 -0.70
    5 GFF3068 FIG00538108: hypothetical protein -0.70
    6 GFF2151 twitching motility protein PilG -0.70
    7 GFF2510 Type IV fimbrial assembly, ATPase PilB -0.69
    8 GFF5323 Type IV pilus biogenesis protein PilQ -0.69
    9 GFF3826 Response regulator receiver:LytTr DNA-binding region -0.69
    10 GFF2509 Type IV fimbrial assembly protein PilC -0.69
    11 GFF5322 Type IV pilus biogenesis protein PilP -0.69
    12 GFF993 Type IV pilus biogenesis protein PilF -0.68
    13 GFF2154 twitching motility protein PilJ -0.68
    14 GFF5417 hypothetical protein -0.68
    15 GFF2508 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) -0.68
    16 GFF5319 Type IV pilus biogenesis protein PilM -0.68
    17 GFF5419 Type IV pilus biogenesis protein PilE -0.68
    18 GFF5418 Type IV fimbrial biogenesis protein PilY1 -0.68
    19 GFF33 Type IV pilus biogenesis protein PilZ -0.68
    20 GFF5414 hypothetical protein -0.67

    Or look for positive cofitness