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  • Negative cofitness for GFF3260 from Variovorax sp. SCN45

    Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases
    SEED: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF891 Gfa-like protein -0.58
    2 GFF2357 DNA repair protein RecN -0.56
    3 GFF1745 Acyl-CoA dehydrogenase -0.52
    4 GFF5146 no description -0.52
    5 GFF3127 no description -0.51
    6 GFF1224 Transcriptional regulator, LysR family -0.51
    7 GFF2120 Type IV fimbrial biogenesis protein PilX -0.50
    8 GFF110 pyridoxal-phosphate dependent enzyme family protein -0.49
    9 GFF3974 Oxidoreductase, short-chain dehydrogenase/reductase family -0.49
    10 GFF3625 Ferredoxin, 2Fe-2S -0.48
    11 GFF1094 Phosphate ABC transporter, permease protein PstA (TC 3.A.1.7.1) -0.47
    12 GFF6893 Phenazine biosynthesis protein PhzF like -0.47
    13 GFF5142 no description -0.47
    14 GFF4945 probable GntR-family transcriptional regulator -0.46
    15 GFF236 Two-component transcriptional response regulator receiver domain -0.46
    16 GFF1078 hypothetical protein -0.46
    17 GFF3960 3'-to-5' oligoribonuclease (orn) -0.45
    18 GFF2680 Protein of unknown function DUF1058 -0.45
    19 GFF5984 L-lactate dehydrogenase -0.45
    20 GFF1608 Aminotransferase, class III -0.45

    Or look for positive cofitness