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  • Negative cofitness for GFF3247 from Variovorax sp. SCN45

    FIG027190: Putative transmembrane protein
    SEED: FIG027190: Putative transmembrane protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3743 Twitching motility protein PilT -0.61
    2 GFF4439 Probable transmembrane protein -0.61
    3 GFF6723 Cysteine desulfurase (EC 2.8.1.7) -0.61
    4 GFF24 VgrG protein -0.58
    5 GFF776 Putative large exoprotein involved in heme utilization or adhesion of ShlA/HecA/FhaA family -0.58
    6 GFF2011 hypothetical protein -0.58
    7 GFF1631 L-lysine 6-monooxygenase (Lysine N(6)-hydroxylase) protein -0.56
    8 GFF2153 type IV pili signal transduction protein PilI -0.56
    9 GFF3600 Pantothenate kinase type III, CoaX-like (EC 2.7.1.33) -0.55
    10 GFF6701 Regulatory protein, RpfE type -0.55
    11 GFF774 no description -0.55
    12 GFF634 Urea ABC transporter, permease protein UrtC -0.54
    13 GFF642 Membrane protease family protein BA0301 -0.54
    14 GFF3143 hypothetical protein -0.53
    15 GFF4013 hypothetical protein -0.53
    16 GFF2304 Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion -0.53
    17 GFF5071 AmpG permease -0.52
    18 GFF2306 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA -0.52
    19 GFF4800 DNA mismatch repair protein MutL -0.52
    20 GFF1976 Transcriptional regulator, AcrR family -0.52

    Or look for positive cofitness