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  • Negative cofitness for PS417_16415 from Pseudomonas simiae WCS417

    tRNA 2-thiocytidine biosynthesis protein TtcA
    SEED: tRNA(Cytosine32)-2-thiocytidine synthetase
    KEGG: tRNA 2-thiocytidine biosynthesis protein TtcA

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_02750 alpha/beta hydrolase -0.23
    2 PS417_00210 hypothetical protein -0.21
    3 PS417_17705 LacI family transcriptional regulator -0.20
    4 PS417_11925 hypothetical protein -0.20
    5 PS417_20260 copper oxidase -0.20
    6 PS417_25970 diguanylate cyclase -0.19
    7 PS417_21180 short-chain dehydrogenase -0.19
    8 PS417_04010 glycine/betaine ABC transporter ATP-binding protein -0.18
    9 PS417_09415 3-isopropylmalate dehydratase -0.18
    10 PS417_25700 cyclic AMP receptor protein -0.18
    11 PS417_27385 amino acid ABC transporter substrate-binding protein -0.17
    12 PS417_06160 beta-(1-3)-glucosyl transferase -0.17
    13 PS417_03355 cation transporter -0.17
    14 PS417_27655 LysR family transcriptional regulator -0.17
    15 PS417_24680 murein transglycosylase -0.17
    16 PS417_15715 nitrate reductase -0.17
    17 PS417_06515 beta-agarase -0.17
    18 PS417_06785 NADH:flavin oxidoreductase -0.16
    19 PS417_05550 amino acid ABC transporter permease -0.16
    20 PS417_06705 3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6) (from data) -0.16

    Or look for positive cofitness