Negative cofitness for GFF319 from Variovorax sp. SCN45

EXTRACYTOPLASMIC FUNCTION ALTERNATIVE SIGMA FACTOR

Computing cofitness values with 61 experiments...

Genes with the strongest negative cofitness:

Rank Hit Name Description Cofit  
1 GFF5811 Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtB-like -0.53
2 GFF5267 Glucose-6-phosphate isomerase (EC 5.3.1.9) -0.51
3 GFF2623 Aspartate aminotransferase -0.51
4 GFF4153 ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) -0.51
5 GFF2182 Inner membrane component of TAM transport system -0.49
6 GFF2207 Flp pilus assembly protein TadB -0.49
7 GFF6509 hypothetical protein -0.49
8 GFF907 Transcriptional regulator, LysR family -0.48
9 GFF744 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases -0.48
10 GFF2183 Outer membrane component of TAM transport system -0.48
11 GFF1927 Alkanesulfonates-binding protein -0.47
12 GFF6182 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) -0.46
13 GFF6513 Phosphogluconate dehydratase (EC 4.2.1.12) -0.46
14 GFF2986 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) -0.46
15 GFF1596 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) -0.46
16 GFF5896 Anthranilate synthase, aminase component (EC 4.1.3.27) -0.46
17 GFF6756 ATP-dependent DNA helicase pcrA (EC 3.6.1.-) -0.46
18 GFF2515 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA -0.46
19 GFF4067 FIG00897050: hypothetical protein -0.45
20 GFF5579 probable bifunctional hydroxylase/oxidoreductase -0.45

Or look for positive cofitness