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  • Negative cofitness for GFF3186 from Variovorax sp. SCN45

    FIG01046500: hypothetical protein
    SEED: FIG01046500: hypothetical protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF2600 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) -0.55
    2 GFF5436 Hypothetical protein COG3496 -0.53
    3 GFF4502 Putative transmembrane protein -0.51
    4 GFF714 no description -0.50
    5 GFF4326 Branched-chain amino acid ABC transporter, substrate-binding protein LivJ (TC 3.A.1.4.1) -0.50
    6 GFF1729 HIPA PROTEIN -0.49
    7 GFF3164 Aerobic cobaltochelatase CobS subunit (EC 6.6.1.2) -0.49
    8 GFF6357 T6SS forkhead associated domain protein ImpI/VasC -0.48
    9 GFF4556 hypothetical protein -0.47
    10 GFF4180 hypothetical protein -0.46
    11 GFF5028 hypothetical protein -0.45
    12 GFF3982 Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1) -0.45
    13 GFF6123 ABC-type antimicrobial peptide transport system, ATPase component -0.44
    14 GFF3766 hypothetical protein -0.44
    15 GFF5019 RNA-binding protein -0.44
    16 GFF3523 hypothetical protein -0.44
    17 GFF5178 Transcriptional regulator, Xre-family with cupin domain -0.44
    18 GFF6312 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) -0.43
    19 GFF2446 FIG00956403: hypothetical protein -0.43
    20 GFF6600 Sulfur carrier protein FdhD -0.43

    Or look for positive cofitness