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  • Negative cofitness for GFF3184 from Variovorax sp. SCN45

    diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
    SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6405 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) -0.64
    2 GFF4857 benzoate MFS transporter BenK -0.63
    3 GFF6052 HNH endonuclease family protein -0.62
    4 GFF2550 Dihydroneopterin triphosphate pyrophosphohydrolase type 2 -0.62
    5 GFF6532 Phosphoglucomutase (EC 5.4.2.2) @ Phosphomannomutase (EC 5.4.2.8) -0.61
    6 GFF6392 hypothetical protein -0.58
    7 GFF6424 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) -0.57
    8 GFF814 BUG/TctC family periplasmic protein -0.57
    9 GFF4397 hypothetical protein -0.56
    10 GFF4886 hypothetical protein -0.56
    11 GFF4406 Alkane-1 monooxygenase (EC 1.14.15.3) -0.56
    12 GFF4703 Xylitol dehydrogenase (EC 1.1.1.9) -0.55
    13 GFF259 Bis-ABC ATPase YheS -0.55
    14 GFF6481 Bll1370 protein -0.55
    15 GFF1007 Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22) -0.54
    16 GFF3299 Pirin -0.54
    17 GFF7374 FIG00984748: hypothetical protein -0.54
    18 GFF5086 Glycine betaine transporter OpuD -0.54
    19 GFF1119 Ribonuclease HI (EC 3.1.26.4) -0.54
    20 GFF6146 Phosphonoacetate hydrolase (EC 3.11.1.2) -0.54

    Or look for positive cofitness