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  • Negative cofitness for GFF3176 from Variovorax sp. SCN45

    Two-component transcriptional response regulator, LuxR family
    SEED: Two-component response regulator

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4042 Copper-sensing two-component system response regulator CusR -0.53
    2 GFF4618 Hexuronate utilization operon transcriptional repressor ExuR -0.53
    3 GFF4182 Extracytoplasmic function (ECF) sigma factor VreI -0.47
    4 GFF2927 Peptidylprolyl isomerase, FKBP-type (EC 5.2.1.8) -0.47
    5 GFF804 Fumarylacetoacetate hydrolase family protein -0.47
    6 GFF3357 hypothetical protein -0.46
    7 GFF4423 Conjugative transfer protein TrbI -0.46
    8 GFF1220 Transcriptional regulator, MerR family -0.45
    9 GFF1413 hypothetical protein -0.45
    10 GFF2001 Putative phosphatase YieH -0.44
    11 GFF6079 hypothetical protein -0.43
    12 GFF1323 Methionine aminopeptidase (EC 3.4.11.18) -0.43
    13 GFF1601 no description -0.43
    14 GFF7025 hypothetical protein -0.43
    15 GFF6204 Diguanylate cyclase/phosphodiesterase domain 2 (EAL) -0.43
    16 GFF891 Gfa-like protein -0.42
    17 GFF7391 hypothetical protein -0.41
    18 GFF5529 Putative outer membrane protein -0.41
    19 GFF1022 Acetyltransferase, GNAT family -0.41
    20 GFF5240 General secretion pathway protein K -0.41

    Or look for positive cofitness