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  • Negative cofitness for GFF3173 from Variovorax sp. SCN45

    Transcriptional regulator, IclR family
    SEED: Transcriptional regulator, IclR family

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6086 Putative short-chain dehydrogenase -0.68
    2 GFF1295 FIG00455815: hypothetical protein -0.63
    3 GFF7149 4-hydroxyproline epimerase (EC 5.1.1.8) -0.61
    4 GFF3386 hypothetical protein -0.59
    5 GFF4184 Filamentous haemagglutinin family outer membrane protein associated with VreARI signalling system -0.59
    6 GFF3576 no description -0.58
    7 GFF4159 no description -0.58
    8 GFF6909 Amidohydrolase -0.57
    9 GFF3284 hypothetical protein -0.57
    10 GFF1149 FIG110192: hypothetical protein -0.57
    11 GFF4252 hypothetical protein -0.57
    12 GFF7359 High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) -0.56
    13 GFF4379 y4eB gene in pNGR234a homolog -0.56
    14 GFF4502 Putative transmembrane protein -0.56
    15 GFF5598 putative phospholipase D family protein -0.56
    16 GFF5844 Phospholipase A1 (EC 3.1.1.32) (EC 3.1.1.4) @ Outer membrane phospholipase A -0.55
    17 GFF2649 putative autotransporter protein -0.54
    18 GFF6792 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) -0.54
    19 GFF1331 Transcriptional regulator, AraC family -0.54
    20 GFF185 hypothetical protein -0.53

    Or look for positive cofitness