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  • Negative cofitness for PS417_15890 from Pseudomonas simiae WCS417

    RNA polymerase sigma factor
    SEED: RNA polymerase sigma-70 factor, ECF subfamily
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_04940 outer membrane usher protein -0.24
    2 PS417_17270 D-alanyl-D-alanine endopeptidase -0.22
    3 PS417_18915 hypothetical protein -0.21
    4 PS417_14620 hypothetical protein -0.20
    5 PS417_15620 alpha/beta hydrolase -0.18
    6 PS417_12155 transporter -0.18
    7 PS417_02035 3-ketoacyl-ACP reductase -0.18
    8 PS417_15730 major facilitator transporter -0.18
    9 PS417_00295 hypothetical protein -0.17
    10 PS417_27330 membrane protein -0.17
    11 PS417_17500 sulfurtransferase -0.17
    12 PS417_24320 large-conductance mechanosensitive channel -0.17
    13 PS417_19495 N-acyl-L-amino acid amidohydrolase -0.16
    14 PS417_27970 type VI secretion system protein ImpG -0.16
    15 PS417_27560 adenylate cyclase -0.15
    16 PS417_07275 5-carboxymethyl-2-hydroxymuconate isomerase -0.15
    17 PS417_09475 class V aminotransferase -0.15
    18 PS417_01515 alpha/beta hydrolase -0.15
    19 PS417_10320 hypothetical protein -0.15
    20 PS417_25115 lipopolysaccharide biosynthesis protein -0.15

    Or look for positive cofitness