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  • Negative cofitness for GFF3073 from Variovorax sp. SCN45

    Fatty acid hydroxylase family (carotene hydroxylase/sterol desaturase)
    SEED: Probable transmembrane protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF911 KEGG: transcriptional regulator -0.57
    2 GFF3984 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) -0.56
    3 GFF883 2-pyrone-4,6-dicarboxylic acid hydrolase (EC 3.1.1.57) -0.55
    4 GFF278 O-methyltransferase Rv0190 -0.54
    5 GFF668 Transcriptional regulator, LysR family -0.53
    6 GFF4968 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit -0.53
    7 GFF3570 Organic hydroperoxide resistance transcriptional regulator -0.52
    8 GFF6371 T6SS component TssC (ImpC/VipB) -0.51
    9 GFF3468 Nucleoside-diphosphate-sugar epimerases -0.51
    10 GFF42 hypothetical protein -0.50
    11 GFF6847 Ferric siderophore transport system, periplasmic binding protein TonB -0.50
    12 GFF1957 no description -0.49
    13 GFF585 no description -0.49
    14 GFF5801 Urea ABC transporter, permease protein UrtC -0.49
    15 GFF6521 Auxin efflux carrier family protein -0.49
    16 GFF145 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) -0.49
    17 GFF608 VgrG protein -0.49
    18 GFF1855 no description -0.48
    19 GFF4142 no description -0.48
    20 GFF1282 Chromate reductase (EC 1.6.5.2) -0.48

    Or look for positive cofitness