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  • Negative cofitness for GFF307 from Variovorax sp. SCN45

    FIG143263: Glycosyl transferase
    SEED: FIG143263: Glycosyl transferase

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF2102 no description -0.65
    2 GFF4487 putative secreted protein -0.56
    3 GFF4003 FIGfam005179 -0.55
    4 GFF5668 Uncharacterized MFS-type transporter -0.51
    5 GFF6699 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) -0.50
    6 GFF1499 BUG/TctC family periplasmic protein -0.50
    7 GFF114 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) -0.47
    8 GFF6947 transcriptional regulator, Crp/Fnr family -0.47
    9 GFF2084 Phosphatidate cytidylyltransferase (EC 2.7.7.41) -0.47
    10 GFF4281 Transcriptional regulator, IclR family -0.46
    11 GFF920 Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily -0.46
    12 GFF3368 Pyrimidine permease -0.46
    13 GFF5630 hypothetical protein -0.45
    14 GFF6647 Two-component transcriptional response regulator, LuxR family -0.45
    15 GFF698 Transcriptional regulator, LysR family -0.45
    16 GFF4784 no description -0.45
    17 GFF5594 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) -0.45
    18 GFF5623 Metal-dependent amidase/aminoacylase/carboxypeptidase -0.44
    19 GFF6160 Dehydrogenase molybdenum cofactor insertion protein, XdhC/CoxF family -0.44
    20 GFF4423 Conjugative transfer protein TrbI -0.44

    Or look for positive cofitness