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  • Negative cofitness for GFF3064 from Variovorax sp. SCN45

    Exodeoxyribonuclease III (EC 3.1.11.2)
    SEED: Exodeoxyribonuclease III (EC 3.1.11.2)
    KEGG: exodeoxyribonuclease III

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF36 Similar to Agmatine deiminase -0.58
    2 GFF3456 Possible regulatory protein similar to urea ABC transporter, substrate binding protein -0.58
    3 GFF636 Urea ABC transporter, substrate-binding protein UrtA -0.58
    4 GFF6390 GtrA-like protein -0.54
    5 GFF72 D-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.-) -0.53
    6 GFF2738 hypothetical protein -0.52
    7 GFF7373 CaiB/BaiF family protein -0.52
    8 GFF6049 Acyl-CoA dehydrogenase family protein -0.51
    9 GFF2504 Cell division protein ZapD -0.51
    10 GFF5862 KEGG: RNA polymerase sigma-70 factor, ECF subfamily -0.51
    11 GFF563 Type IV fimbrial biogenesis protein PilY1 -0.51
    12 GFF3758 NAD-specific glutamate dehydrogenase (EC 1.4.1.2); NADP-specific glutamate dehydrogenase (EC 1.4.1.4) -0.51
    13 GFF251 hypothetical protein -0.50
    14 GFF5021 Tripartite tricarboxylate transporter TctA family -0.50
    15 GFF682 2-hydroxychromene-2-carboxylate isomerase family protein -0.50
    16 GFF6171 Na(+) H(+) antiporter subunit D -0.50
    17 GFF4552 Nitrilotriacetate monooxygenase component B (EC 1.14.13.-) -0.49
    18 GFF4726 hypothetical protein -0.49
    19 GFF1044 hypothetical protein -0.49
    20 GFF4656 TonB-dependent siderophore receptor -0.49

    Or look for positive cofitness