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  • Negative cofitness for GFF3061 from Variovorax sp. SCN45

    BUG/TctC family periplasmic protein
    SEED: Tricarboxylate transport protein TctC

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3284 hypothetical protein -0.62
    2 GFF6658 Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtC (RND type) -0.58
    3 GFF6515 no description -0.53
    4 GFF5859 KEGG: nickel transport system substrate-binding protein -0.53
    5 GFF5304 no description -0.53
    6 GFF5429 Iron(III) dicitrate transport protein FecA -0.52
    7 GFF7359 High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) -0.52
    8 GFF7378 protein of unknown function DUF1311 -0.51
    9 GFF3577 Transcriptional regulator, LysR family -0.51
    10 GFF4511 Transcriptional regulator, LysR family -0.51
    11 GFF2945 Possible glyoxylase family protein (Lactoylglutathione lyase) (EC 4.4.1.5) -0.50
    12 GFF2738 hypothetical protein -0.50
    13 GFF3364 Rhodanese-related sulfurtransferase -0.49
    14 GFF6460 Sensor protein BasS/PmrB (activates BasR/PmrA) -0.49
    15 GFF3270 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) -0.48
    16 GFF1604 Prolidase (EC 3.4.13.9) -0.47
    17 GFF971 NLP/P60 protein -0.47
    18 GFF4262 hypothetical protein -0.47
    19 GFF5435 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79), plant type -0.47
    20 GFF5379 Putative hydrolase -0.47

    Or look for positive cofitness