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  • Negative cofitness for GFF3050 from Variovorax sp. SCN45

    Lactam utilization protein LamB
    SEED: Lactam utilization protein LamB
    KEGG: UPF0271 protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6153 Transcriptional activator of acetoin/glycerol metabolism -0.60
    2 GFF2521 FIG00931781: hypothetical protein -0.58
    3 GFF6522 Zinc-regulated outer membrane receptor -0.56
    4 GFF2830 Uncharacterized protein CC_3061 -0.56
    5 GFF7162 DNA helicase II related protein -0.55
    6 GFF4122 hypothetical protein -0.55
    7 GFF6144 2-aminoethylphosphonate ABC transporter substrate-binding protein -0.55
    8 GFF7304 Limit dextrin alpha-1,6-maltotetraose-hydrolase (EC 3.2.1.196) -0.54
    9 GFF397 NAD(P)H-hydrate epimerase (EC 5.1.99.6) / ADP-dependent (S)-NAD(P)H-hydrate dehydratase (EC 4.2.1.136) -0.54
    10 GFF4240 Integral membrane protein -0.54
    11 GFF334 Transcriptional regulator, AraC family -0.54
    12 GFF6412 Histidine ABC transporter, permease protein -0.53
    13 GFF794 KEGG: RNA polymerase sigma-70 factor, ECF subfamily -0.53
    14 GFF7189 dioxygenase, TauD/TfdA family -0.53
    15 GFF3456 Possible regulatory protein similar to urea ABC transporter, substrate binding protein -0.52
    16 GFF876 hypothetical protein -0.52
    17 GFF5851 TPR repeat -0.51
    18 GFF3794 hypothetical protein -0.50
    19 GFF1044 hypothetical protein -0.50
    20 GFF6203 UDP-glucose 4-epimerase (EC 5.1.3.2) -0.49

    Or look for positive cofitness