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  • Negative cofitness for GFF3033 from Sphingobium sp. HT1-2

    RNA polymerase, sigma-24 subunit, ECF subfamily
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Computing cofitness values with 18 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3090 hypothetical protein -0.83
    2 GFF4648 hypothetical protein -0.79
    3 GFF1076 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) -0.79
    4 GFF2275 ATP-DEPENDENT PROTEASE SUBUNIT -0.78
    5 GFF3535 Sulfate permease -0.77
    6 GFF2568 hypothetical protein -0.76
    7 GFF1985 Transcriptional regulator, ArsR family -0.74
    8 GFF4809 hypothetical protein -0.74
    9 GFF2620 hypothetical protein -0.73
    10 GFF3987 hypothetical protein -0.73
    11 GFF2259 '5'-nucleotidase SurE (EC 3.1.3.5)' transl_table=11 -0.73
    12 GFF4778 Uncharacterized UPF0118 membrane protein -0.73
    13 GFF3118 Sensory box histidine kinase/response regulator -0.72
    14 GFF3063 hypothetical protein -0.71
    15 GFF1656 Proline dipeptidase -0.71
    16 GFF1404 Enoyl-CoA hydratase (EC 4.2.1.17) -0.70
    17 GFF3031 Copper resistance protein B -0.70
    18 GFF889 Acetoin dehydrogenase E1 component alpha-subunit (EC 2.3.1.190) -0.70
    19 GFF1085 Phage integrase -0.70
    20 GFF3221 hypothetical protein -0.70

    Or look for positive cofitness