Negative cofitness for GFF3029 from Variovorax sp. SCN45

T6SS component TssM (IcmF/VasK)
SEED: IcmF-related protein

Computing cofitness values with 61 experiments...

Genes with the strongest negative cofitness:

Rank	Hit	Name	Description	Cofit
1	GFF3596		TRAP-type C4-dicarboxylate transport system, large permease component	-0.61
2	GFF3676		Outer membrane protein romA	-0.56
3	GFF6969		hypothetical protein	-0.56
4	GFF1687		BUG/TctC family periplasmic protein	-0.55
5	GFF5780		Positive regulator of L-idonate catabolism	-0.54
6	GFF4221		3-oxoadipate CoA-transferase subunit A (EC 2.8.3.6)	-0.54
7	GFF4906		hypothetical protein	-0.53
8	GFF4120		no description	-0.53
9	GFF6328		LPS-assembly lipoprotein LptE	-0.51
10	GFF1489		Tetrapartite efflux system, outer membrane factor lipoprotein FusA-like	-0.50
11	GFF4292		no description	-0.49
12	GFF2546		sodium-solute symporter, putative	-0.49
13	GFF5264		Spermidine/putrescine import ABC transporter ATP-binding protein PotA (TC 3.A.1.11.1)	-0.49
14	GFF4178		5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)	-0.49
15	GFF6750		hypothetical protein	-0.49
16	GFF400		Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase (EC 2.8.4.4)	-0.48
17	GFF1930		RTX toxin transporter, ATP-binding protein	-0.48
18	GFF6711		ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines)	-0.48
19	GFF2144		tRNA-dihydrouridine synthase DusB	-0.48
20	GFF3990		hypothetical protein	-0.47

Or look for positive cofitness