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  • Negative cofitness for GFF3025 from Sphingobium sp. HT1-2

    Efflux transport system, outer membrane factor (OMF) lipoprotein
    SEED: Heavy metal RND efflux outer membrane protein, CzcC family

    Computing cofitness values with 16 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF671 RidA/YER057c/UK114 superfamily, group 6 -0.76
    2 GFF1125 hypothetical protein -0.76
    3 GFF343 Glycosyl transferase, group 1 family protein -0.70
    4 GFF511 DNA-binding response regulator -0.70
    5 GFF5030 PTS system, fructose-specific IIA component (EC 2.7.1.202) / Phosphotransferase system, phosphocarrier protein HPr / Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) -0.70
    6 GFF4895 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) -0.69
    7 GFF2400 (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) -0.69
    8 GFF4653 hypothetical protein -0.68
    9 GFF600 Ribonuclease P protein component (EC 3.1.26.5) -0.66
    10 GFF720 outer membrane protein-like -0.65
    11 GFF1565 hypothetical protein -0.65
    12 GFF813 hypothetical protein -0.65
    13 GFF3843 ABC transporter, permease protein -0.65
    14 GFF833 hypothetical protein -0.64
    15 GFF1007 hypothetical protein -0.64
    16 GFF1105 Transposase -0.63
    17 GFF5175 CzcABC family efflux RND transporter, transmembrane protein -0.63
    18 GFF2350 PilT protein-like -0.62
    19 GFF2682 hypothetical protein -0.61
    20 GFF3698 hypothetical protein -0.61

    Or look for positive cofitness