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  • Negative cofitness for GFF3017 from Variovorax sp. SCN45

    T6SS AAA+ chaperone ClpV (TssH)
    SEED: ClpB protein
    KEGG: type VI secretion system protein VasG

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6637 Putative amidase amiC (EC 3.5.1.4) -0.62
    2 GFF7342 Oxidoreductase -0.57
    3 GFF3759 Uridine kinase family protein YggC homolog -0.57
    4 GFF6873 Aminotransferase, DegT/DnrJ/EryC1/StrS family -0.57
    5 GFF804 Fumarylacetoacetate hydrolase family protein -0.57
    6 GFF2311 Putative PRS2 protein -0.56
    7 GFF7322 hypothetical protein -0.56
    8 GFF6392 hypothetical protein -0.56
    9 GFF6734 Transcriptional regulator, AraC family -0.54
    10 GFF5402 Transcriptional regulator, IclR family -0.53
    11 GFF1148 hypothetical protein -0.53
    12 GFF2103 Regulatory protein, LuxR:Tetratricopeptide TPR_4 -0.53
    13 GFF6855 hypothetical protein -0.53
    14 GFF7116 2,3-dihydroxybiphenyl 1,2-dioxygenase (EC 1.13.11.39) -0.52
    15 GFF3479 no description -0.52
    16 GFF5830 Aldehyde dehydrogenase (EC 1.2.1.3) -0.51
    17 GFF1376 hypothetical protein -0.51
    18 GFF3435 predicted integral membrane protein -0.51
    19 GFF4242 TRAP-type C4-dicarboxylate transport system, periplasmic component -0.50
    20 GFF7272 D-glucarate permease -0.50

    Or look for positive cofitness