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  • Negative cofitness for GFF3013 from Variovorax sp. SCN45

    KEGG: type VI secretion system secreted protein Hcp

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4743 Aspartate aminotransferase (EC 2.6.1.1) -0.56
    2 GFF2885 Transcriptional regulator, LysR family -0.55
    3 GFF1225 Glycine/D-amino acid oxidases (deaminating) -0.54
    4 GFF5001 Oxidoreductase, molybdopterin-binding -0.54
    5 GFF4963 Transcriptional regulator, AraC family -0.53
    6 GFF336 no description -0.52
    7 GFF5811 Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtB-like -0.51
    8 GFF6037 Transcriptional regulator, Crp/Fnr family -0.49
    9 GFF3945 Phosphate transport regulator (distant homolog of PhoU) -0.49
    10 GFF7283 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) -0.49
    11 GFF4487 putative secreted protein -0.48
    12 GFF6474 hypothetical protein -0.48
    13 GFF5868 hypothetical protein -0.47
    14 GFF5750 Flagellar M-ring protein FliF -0.47
    15 GFF5869 internalin, putative -0.47
    16 GFF464 Transcriptional regulator, GntR family -0.47
    17 GFF2318 Transcriptional regulator ArgP, LysR family -0.46
    18 GFF7046 FIG00854755: hypothetical protein -0.46
    19 GFF5261 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) -0.46
    20 GFF6458 Lipid A 4'-phosphatase LpxF-like, putative -0.46

    Or look for positive cofitness