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  • Negative cofitness for GFF3012 from Variovorax sp. SCN45

    T6SS component TssC (ImpC/VipB)
    SEED: Uncharacterized protein ImpC
    KEGG: type VI secretion system protein ImpC

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF5340 Efflux ABC transporter, ATP-binding protein -0.58
    2 GFF1210 D-aminopeptidase dipeptide-binding protein DppA (EC 3.4.11.-) -0.57
    3 GFF6243 Ku domain protein -0.55
    4 GFF4023 no description -0.50
    5 GFF4045 no description -0.49
    6 GFF6810 no description -0.48
    7 GFF5243 General secretion pathway protein H -0.48
    8 GFF5765 Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) -0.48
    9 GFF7066 Two-component transcriptional response regulator receiver domain -0.47
    10 GFF4176 Transcriptional activator MetR -0.47
    11 GFF3240 hypothetical protein -0.47
    12 GFF6843 FIG00958542: hypothetical protein -0.46
    13 GFF4906 hypothetical protein -0.46
    14 GFF5308 Epoxide hydrolase (EC 3.3.2.9) -0.45
    15 GFF1600 Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1) -0.45
    16 GFF5669 hypothetical protein -0.45
    17 GFF4993 putative tetratricopeptide repeat family protein -0.45
    18 GFF1863 Uncharacterized MFS-type transporter -0.45
    19 GFF1660 Type IV fimbrial biogenesis protein PilY1 -0.44
    20 GFF890 Two-component system sensor histidine kinase -0.44

    Or look for positive cofitness