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  • Negative cofitness for PS417_15355 from Pseudomonas simiae WCS417

    sigma factor sigB regulation protein rsbQ
    SEED: Hydrolase of unknown specificity RsbQ, part of a novel [RsbQ - PAS domain] bacterial sensing module

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_12195 ABC transporter permease -0.27
    2 PS417_17705 LacI family transcriptional regulator -0.26
    3 PS417_25840 SpoVR family protein -0.25
    4 PS417_12170 ABC transporter permease -0.24
    5 PS417_25835 hypothetical protein -0.24
    6 PS417_05840 LuxR family transcriptional regulator -0.23
    7 PS417_16990 acyl-CoA dehydrogenase -0.22
    8 PS417_00335 cytochrome B561 -0.22
    9 PS417_19965 histidine kinase -0.22
    10 PS417_25790 aminoglycoside phosphotransferase -0.21
    11 PS417_25650 anhydro-N-acetylmuramic acid kinase -0.21
    12 PS417_05570 DeoR faimly transcriptional regulator -0.21
    13 PS417_10045 hypothetical protein -0.21
    14 PS417_06840 beta-D-glucoside glucohydrolase -0.20
    15 PS417_25830 serine/threonine protein kinase -0.20
    16 PS417_15365 diaminopimelate epimerase -0.19
    17 PS417_07620 beta-hexosaminidase -0.19
    18 PS417_00300 cytochrome B559 subunit alpha -0.19
    19 PS417_04065 peptide ABC transporter substrate-binding protein -0.19
    20 PS417_03135 acyl dehydratase -0.19

    Or look for positive cofitness