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  • Negative cofitness for GFF2998 from Variovorax sp. SCN45

    Virulence factor BrkB
    SEED: Ribonuclease BN (EC 3.1.-.-)
    KEGG: membrane protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3931 Protein sirB1 -0.59
    2 GFF6186 no description -0.56
    3 GFF6148 hypothetical protein -0.53
    4 GFF5287 FIG00455092: hypothetical protein -0.51
    5 GFF5572 FIG00984604: hypothetical protein -0.51
    6 GFF5288 Uncharacterized protein PA4513 -0.51
    7 GFF1004 Putative inner membrane protein YjeT (clustered with HflC) -0.50
    8 GFF5035 Opine oxidase subunit A -0.50
    9 GFF5936 T6SS AAA+ chaperone ClpV (TssH) -0.49
    10 GFF5043 ABC transporter, permease protein (cluster 9, phospholipid) -0.49
    11 GFF6077 G:T/U mismatch-specific uracil/thymine DNA-glycosylase (EC 3.2.2.27) -0.48
    12 GFF5851 TPR repeat -0.48
    13 GFF6014 Transcriptional regulator, LysR family -0.48
    14 GFF6844 Putative PpiC-type peptidyl-prolyl cis-trans isomerase precursor associated with VreARI signaling system -0.47
    15 GFF7184 hypothetical protein -0.47
    16 GFF4563 Ferredoxin, 2Fe-2S -0.46
    17 GFF2163 hypothetical protein -0.46
    18 GFF4744 Permease of the drug/metabolite transporter (DMT) superfamily -0.46
    19 GFF6659 Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtB (RND type) -0.46
    20 GFF5263 Ferric iron ABC transporter, permease protein -0.46

    Or look for positive cofitness