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  • Negative cofitness for GFF2992 from Variovorax sp. SCN45

    BUG/TctC family periplasmic protein
    SEED: Tricarboxylate transport protein TctC

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF2395 D-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.-) -0.53
    2 GFF5196 L-arabinose ABC transporter, permease protein AraH -0.53
    3 GFF2125 hypothetical protein -0.52
    4 GFF6983 FIG140336: TPR domain protein -0.50
    5 GFF4727 Two-component transcriptional response regulator, LuxR family -0.49
    6 GFF1459 Glutathione S-transferase (EC 2.5.1.18) -0.48
    7 GFF4796 L-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.16) -0.47
    8 GFF5139 no description -0.47
    9 GFF2551 Endonuclease/exonuclease/phosphatase -0.47
    10 GFF1391 Uncharacterized MFS-type transporter -0.47
    11 GFF2494 Threonine-synthase-like protein 4 -0.47
    12 GFF2113 NADH dehydrogenase (EC 1.6.99.3) -0.46
    13 GFF2004 no description -0.46
    14 GFF1260 no description -0.46
    15 GFF580 Rhodanese domain protein UPF0176, Betaproteobacterial subgroup -0.46
    16 GFF1935 GNAT family acetyltransferase PA5433 -0.45
    17 GFF1582 BUG/TctC family periplasmic protein -0.45
    18 GFF5254 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) -0.45
    19 GFF6575 Conjugative transfer protein TrbJ -0.45
    20 GFF6242 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD -0.44

    Or look for positive cofitness