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  • Negative cofitness for GFF2983 from Variovorax sp. SCN45

    Transcriptional regulator YfeR, LysR family
    SEED: LysR family transcriptional regulator YfeR

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4789 FIG01126746: hypothetical protein -0.58
    2 GFF99 KEGG: RNA polymerase sigma-70 factor, ECF subfamily -0.54
    3 GFF6984 RNA polymerase sigma factor for flagellar operon -0.48
    4 GFF3201 no description -0.47
    5 GFF4849 Conjugative transfer protein TrbB -0.47
    6 GFF6433 hypothetical protein -0.45
    7 GFF6405 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) -0.45
    8 GFF2021 FIG00538369: hypothetical protein -0.45
    9 GFF5918 T6SS component TssC (ImpC/VipB) -0.45
    10 GFF469 hypothetical protein -0.45
    11 GFF6781 Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) / Aminodeoxychorismate lyase (EC 4.1.3.38) -0.45
    12 GFF6157 Carbon monoxide oxidation accessory protein CoxD -0.44
    13 GFF4363 Chromosome initiation inhibitor -0.43
    14 GFF2322 Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54) -0.43
    15 GFF795 5-methyltetrahydropteroyltriglutamate--homocystei ne methyltransferase (EC 2.1.1.14) -0.42
    16 GFF3710 Lactoylglutathione lyase and related lyases -0.42
    17 GFF5475 Uncharacterized MFS-type transporter -0.42
    18 GFF3997 Short-chain dehydrogenase/reductase SDR -0.42
    19 GFF40 no description -0.42
    20 GFF6207 Allantoin racemase (EC 5.1.99.3) -0.42

    Or look for positive cofitness