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  • Negative cofitness for GFF2977 from Sphingobium sp. HT1-2

    RND efflux system, inner membrane transporter
    SEED: RND efflux system, inner membrane transporter CmeB

    Computing cofitness values with 18 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3227 hypothetical protein -0.78
    2 GFF4310 IncF plasmid conjugative transfer pilus assembly protein TraC -0.73
    3 GFF911 3-hydroxyacyl-CoA dehydrogenase -0.71
    4 GFF2165 hypothetical protein -0.66
    5 GFF5334 Putative FecR -0.66
    6 GFF801 Phenazine biosynthesis protein PhzF like -0.65
    7 GFF463 Glycosyl transferase, group 1 family protein -0.65
    8 GFF956 AAA family ATPase Cdc48 -0.64
    9 GFF415 Catalase-peroxidase KatG (EC 1.11.1.21) -0.64
    10 GFF4409 hypothetical protein -0.63
    11 GFF2906 hypothetical protein -0.62
    12 GFF1382 hypothetical protein -0.62
    13 GFF5068 hypothetical protein -0.60
    14 GFF3841 Acidobacterial duplicated orphan permease (function unknown) -0.59
    15 GFF1476 RNA polymerase ECF-type sigma factor -0.58
    16 GFF5324 hypothetical protein -0.58
    17 GFF4216 hypothetical protein -0.57
    18 GFF2215 Two-component system sensor histidine kinase -0.57
    19 GFF3229 hypothetical protein -0.57
    20 GFF1992 protein of unknown function DUF559 -0.57

    Or look for positive cofitness