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  • Negative cofitness for GFF2971 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF5936 T6SS AAA+ chaperone ClpV (TssH) -0.58
    2 GFF2985 BUG/TctC family periplasmic protein -0.52
    3 GFF3371 FIG00456413: hypothetical protein -0.51
    4 GFF6712 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) -0.51
    5 GFF5940 T6SS associated component TagJ (ImpE) -0.50
    6 GFF4159 no description -0.49
    7 GFF329 Nucleoside ABC transporter, ATP-binding protein -0.49
    8 GFF621 Aspartate aminotransferase (EC 2.6.1.1) -0.48
    9 GFF2752 FIG00974677: hypothetical protein -0.46
    10 GFF5806 RNA polymerase ECF-type sigma factor -0.46
    11 GFF4379 y4eB gene in pNGR234a homolog -0.46
    12 GFF4252 hypothetical protein -0.46
    13 GFF6171 Na(+) H(+) antiporter subunit D -0.46
    14 GFF791 RNA polymerase sigma factor RpoE -0.46
    15 GFF4769 Outer membrane factor (OMF) lipoprotein associated wth EmrAB-OMF efflux system -0.46
    16 GFF3967 Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8) -0.45
    17 GFF6844 Putative PpiC-type peptidyl-prolyl cis-trans isomerase precursor associated with VreARI signaling system -0.45
    18 GFF562 Type IV pilus biogenesis protein PilE -0.45
    19 GFF1907 Transcriptional regulator, AraC family -0.44
    20 GFF2897 Glutathione S-transferase-like( EC:2.5.1.18 ) -0.44

    Or look for positive cofitness