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  • Negative cofitness for GFF2967 from Variovorax sp. SCN45

    Oxidoreductase, short-chain dehydrogenase/reductase family
    SEED: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
    KEGG: 3-oxoacyl-[acyl-carrier protein] reductase

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4299 3-ketoacyl-CoA thiolase -0.57
    2 GFF5916 T6SS component TssA (ImpA) -0.53
    3 GFF1507 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) -0.53
    4 GFF5160 Outer membrane protein W precursor -0.52
    5 GFF5216 Metal dependent phosphohydrolase -0.51
    6 GFF3342 FIG00347825: hypothetical protein -0.50
    7 GFF2613 no description -0.50
    8 GFF1449 Predicted pyridoxine biosynthesis protein (probably from glycolaldehide) -0.49
    9 GFF4531 Pseudouridine synthase -0.49
    10 GFF1768 FIG00729359: hypothetical protein -0.49
    11 GFF5579 probable bifunctional hydroxylase/oxidoreductase -0.49
    12 GFF7242 hypothetical protein -0.49
    13 GFF5982 Transcriptional regulator, AcrR family -0.49
    14 GFF7371 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) -0.48
    15 GFF1367 Transcriptional regulator, LysR family -0.47
    16 GFF2614 no description -0.47
    17 GFF6665 Autolysin sensor kinase (EC 2.7.3.-) -0.46
    18 GFF2656 Acyltransferase 3 -0.45
    19 GFF1943 DNA polymerase III alpha subunit (EC 2.7.7.7) -0.45
    20 GFF4987 3-fumarylpyruvate hydrolase (EC 3.7.1.20) -0.45

    Or look for positive cofitness