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  • Negative cofitness for GFF2963 from Variovorax sp. SCN45

    Efflux transport system, outer membrane factor (OMF) lipoprotein
    SEED: Heavy metal RND efflux outer membrane protein, CzcC family

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3481 ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) -0.58
    2 GFF4925 ATPase component BioM of energizing module of biotin ECF transporter -0.57
    3 GFF1822 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) -0.57
    4 GFF5107 Transcriptional regulator, LysR family -0.56
    5 GFF7212 Nitrilotriacetate monooxygenase [FMNH2] -0.55
    6 GFF6120 Exonuclease SbcC -0.54
    7 GFF7046 FIG00854755: hypothetical protein -0.53
    8 GFF6037 Transcriptional regulator, Crp/Fnr family -0.53
    9 GFF5266 Transaldolase (EC 2.2.1.2) -0.52
    10 GFF2050 hypothetical protein -0.52
    11 GFF4527 Transcriptional regulator, GntR family -0.50
    12 GFF2559 hypothetical protein -0.49
    13 GFF5281 Xylulose kinase (EC 2.7.1.17) -0.49
    14 GFF2088 Putative lipase in cluster with Phosphatidate cytidylyltransferase -0.49
    15 GFF6691 hypothetical protein -0.48
    16 GFF2236 hypothetical protein -0.48
    17 GFF1951 no description -0.47
    18 GFF4894 FIG00715096: hypothetical protein -0.47
    19 GFF3739 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) -0.47
    20 GFF2212 KEGG: prepilin peptidase CpaA -0.47

    Or look for positive cofitness