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  • Negative cofitness for PS417_15055 from Pseudomonas simiae WCS417

    C4-dicarboxylate ABC transporter
    SEED: probable dicarboxylate transporter
    KEGG: aerobic C4-dicarboxylate transport protein

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_06100 SAM-dependent methyltransferase -0.26
    2 PS417_15250 DNA repair protein -0.23
    3 PS417_07705 phosphatase -0.23
    4 PS417_26445 ArsR family transcriptional regulator -0.21
    5 PS417_24155 ATP-binding protein -0.20
    6 PS417_21065 3-methylitaconate isomerase -0.20
    7 PS417_17865 2-keto-3-deoxy-L-rhamnonate aldolase -0.19
    8 PS417_28530 iron transporter -0.19
    9 PS417_00485 ABC transporter permease -0.19
    10 PS417_19400 amino acid transporter LysE -0.19
    11 PS417_08760 metalloprotease -0.19
    12 PS417_12855 3-phosphoshikimate 1-carboxyvinyltransferase -0.19
    13 PS417_24745 gamma-glutamyl phosphate reductase -0.18
    14 PS417_00905 histidine kinase -0.18
    15 PS417_10775 hypothetical protein -0.18
    16 PS417_23730 LysR family transcriptional regulator -0.18
    17 PS417_23770 exodeoxyribonuclease V subunit alpha -0.18
    18 PS417_24715 lytic transglycosylase -0.17
    19 PS417_24030 MFS transporter -0.17
    20 PS417_21070 aconitate hydratase -0.17

    Or look for positive cofitness