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  • Negative cofitness for PS417_15040 from Pseudomonas simiae WCS417

    DNA-binding protein
    SEED: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)
    KEGG: GntR family transcriptional regulator / MocR family aminotransferase

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_14175 ArsC family transcriptional regulator -0.20
    2 PS417_05760 phage tail protein -0.20
    3 PS417_06015 hypothetical protein -0.19
    4 PS417_03655 short-chain dehydrogenase -0.18
    5 PS417_11025 sugar ABC transporter substrate-binding protein -0.18
    6 PS417_21240 hypothetical protein -0.17
    7 PS417_15310 type VI secretion protein -0.17
    8 PS417_00235 HAD family hydrolase -0.17
    9 PS417_12380 peptidase S54 -0.17
    10 PS417_00515 membrane protein -0.17
    11 PS417_19505 2,4-diaminobutyrate 4-aminotransferase -0.17
    12 PS417_08070 nickel ABC transporter permease -0.16
    13 PS417_02185 type IV secretion protein Rhs -0.16
    14 PS417_00115 quinone oxidoreductase -0.16
    15 PS417_05785 tail protein -0.16
    16 PS417_10700 NAD(P)H dehydrogenase -0.16
    17 PS417_20235 hypothetical protein -0.16
    18 PS417_09415 3-isopropylmalate dehydratase -0.15
    19 PS417_13195 RND transporter MFP subunit -0.15
    20 PS417_13600 hypothetical protein -0.15

    Or look for positive cofitness