• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Negative cofitness for PS417_14900 from Pseudomonas simiae WCS417

    C4-dicarboxylate ABC transporter permease
    SEED: TRAP-type C4-dicarboxylate transport system, large permease component
    KEGG: C4-dicarboxylate transporter, DctM subunit

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_06985 metal ABC transporter ATPase -0.18
    2 PS417_20300 hypothetical protein -0.18
    3 PS417_13645 ABC transporter -0.18
    4 PS417_09480 peptidase M24 -0.18
    5 PS417_11750 TonB-dependent receptor -0.18
    6 PS417_16020 LysR family transcriptional regulator -0.17
    7 PS417_17070 RNA polymerase subunit sigma-24 -0.17
    8 PS417_09490 quinone oxidoreductase -0.17
    9 PS417_05385 hypothetical protein -0.17
    10 PS417_20235 hypothetical protein -0.17
    11 PS417_20500 hypothetical protein -0.16
    12 PS417_06145 hypothetical protein -0.16
    13 PS417_13110 methylase -0.16
    14 PS417_16245 Fis family transcriptional regulator -0.16
    15 PS417_15830 GNAT family acetyltransferase -0.16
    16 PS417_24880 hypothetical protein -0.15
    17 PS417_18900 alkanesulfonate transporter -0.15
    18 PS417_11150 porin -0.15
    19 PS417_19920 AraC family transcriptional regulator -0.15
    20 PS417_22070 long-chain fatty acid--CoA ligase -0.15

    Or look for positive cofitness