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  • Negative cofitness for PS417_14890 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: Transcriptional regulator, LysR family

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_11825 transcriptional regulator -0.21
    2 PS417_05015 homogentisate 1,2-dioxygenase -0.20
    3 PS417_13800 4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase -0.19
    4 PS417_24145 hypothetical protein -0.19
    5 PS417_04230 lipoprotein -0.19
    6 PS417_17295 RND transporter MFP subunit -0.18
    7 PS417_27875 histidine kinase -0.18
    8 PS417_15320 type VI secretion protein -0.18
    9 PS417_25130 hypothetical protein -0.17
    10 PS417_24295 carbon starvation protein A -0.17
    11 PS417_04755 membrane protein -0.17
    12 PS417_11860 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) (from data) -0.17
    13 PS417_01710 histidine utilization repressor -0.17
    14 PS417_10520 succinyl-CoA:3-ketoacid-CoA transferase -0.17
    15 PS417_00580 acyl-CoA dehydrogenase -0.17
    16 PS417_17340 GNAT family acetyltransferase -0.17
    17 PS417_01730 histidine ABC transporter substrate-binding protein -0.17
    18 PS417_27535 chemotaxis protein CheY -0.16
    19 PS417_28055 peptidase -0.16
    20 PS417_21965 GNAT family acetyltransferase -0.16

    Or look for positive cofitness