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  • Negative cofitness for GFF2888 from Variovorax sp. SCN45

    ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate)
    SEED: Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1)
    KEGG: branched-chain amino acid transport system ATP-binding protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF491 no description -0.54
    2 GFF1211 D-aminopeptidase (EC 3.4.11.19) -0.53
    3 GFF2203 no description -0.52
    4 GFF6833 FIG00432169: hypothetical protein -0.49
    5 GFF2447 beta-lactamase-like protein -0.49
    6 GFF5029 Transcriptional regulator, IclR family -0.49
    7 GFF2449 Beta-ureidopropionase (EC 3.5.1.6) -0.48
    8 GFF5334 Phospholipid ABC transporter ATP-binding protein MlaF -0.48
    9 GFF2408 FIG00976241: hypothetical protein -0.47
    10 GFF4939 hypothetical protein -0.47
    11 GFF972 no description -0.46
    12 GFF1508 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) -0.46
    13 GFF1032 Oxidoreductase, short-chain dehydrogenase/reductase family -0.45
    14 GFF310 FIG025233: SAM-dependent methyltransferases -0.45
    15 GFF1575 BUG/TctC family periplasmic protein -0.45
    16 GFF1388 Paraquat-inducible protein A -0.45
    17 GFF4643 no description -0.45
    18 GFF2583 putative lipoprotein -0.45
    19 GFF4853 Transcriptional regulator, LysR family -0.45
    20 GFF5854 Type I secretion system, outer membrane component LapE -0.44

    Or look for positive cofitness