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  • Negative cofitness for GFF2881 from Variovorax sp. SCN45

    Putative transmembrane protein
    SEED: Probable transmembrane protein
    KEGG: CBS domain-containing membrane protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF5981 COGs COG3558 -0.51
    2 GFF1487 Tetrapartite efflux system component, FusD-like -0.48
    3 GFF386 Membrane-associated zinc metalloprotease -0.47
    4 GFF6586 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) -0.46
    5 GFF88 Probable poly(beta-D-mannuronate) O-acetylase (EC 2.3.1.-) -0.45
    6 GFF210 Putative transmembrane protein -0.44
    7 GFF4994 Acyl-CoA-binding protein -0.44
    8 GFF204 hypothetical protein -0.44
    9 GFF6122 ABC-type antimicrobial peptide transport system, permease component -0.44
    10 GFF1691 Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake -0.44
    11 GFF1958 MBL-fold metallo-hydrolase superfamily -0.44
    12 GFF358 hypothetical protein -0.44
    13 GFF1136 hypothetical protein -0.44
    14 GFF607 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) -0.44
    15 GFF2957 UPF0192 protein YfaS -0.43
    16 GFF4274 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases -0.43
    17 GFF7185 no description -0.43
    18 GFF5479 hypothetical protein -0.42
    19 GFF2042 Efflux ABC transporter, ATP-binding protein -0.42
    20 GFF74 Transcriptional regulator, LysR family -0.42

    Or look for positive cofitness