Negative cofitness for GFF2842 from Variovorax sp. SCN45

RNA polymerase sigma factor RpoS
SEED: RNA polymerase sigma factor RpoS
KEGG: RNA polymerase nonessential primary-like sigma factor

Computing cofitness values with 61 experiments...

Genes with the strongest negative cofitness:

Rank Hit Name Description Cofit  
1 GFF5844 Phospholipase A1 (EC 3.1.1.32) (EC 3.1.1.4) @ Outer membrane phospholipase A -0.61
2 GFF4068 Heavy metal sensor histidine kinase -0.61
3 GFF5948 hypothetical protein -0.60
4 GFF5210 hypothetical protein -0.60
5 GFF6216 hypothetical protein -0.57
6 GFF5325 3-dehydroquinate synthase (EC 4.2.3.4) -0.57
7 GFF3889 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) -0.55
8 GFF517 no description -0.55
9 GFF3497 Transcriptional regulator, Crp/Fnr family -0.55
10 GFF4184 Filamentous haemagglutinin family outer membrane protein associated with VreARI signalling system -0.55
11 GFF1124 no description -0.54
12 GFF185 hypothetical protein -0.54
13 GFF5603 D-xylose ABC transporter, substrate-binding protein XylF -0.53
14 GFF4386 FIG00457034: hypothetical protein -0.53
15 GFF3890 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) -0.53
16 GFF6042 Fatty acid desaturase (EC 1.14.19.1); Delta-9 fatty acid desaturase (EC 1.14.19.1) -0.53
17 GFF613 hypothetical protein -0.52
18 GFF7303 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) -0.52
19 GFF7295 HPr kinase/phosphorylase -0.52
20 GFF6876 Aminotransferase, DegT/DnrJ/EryC1/StrS family -0.52

Or look for positive cofitness