• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Negative cofitness for GFF2833 from Variovorax sp. SCN45

    PKHD-type hydroxylase YbiX
    SEED: Iron-uptake factor PiuC
    KEGG: PKHD-type hydroxylase

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6042 Fatty acid desaturase (EC 1.14.19.1); Delta-9 fatty acid desaturase (EC 1.14.19.1) -0.53
    2 GFF4009 D-amino acid dehydrogenase (EC 1.4.99.6) -0.52
    3 GFF967 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) -0.52
    4 GFF5145 hypothetical protein -0.52
    5 GFF3458 Rubisco activation protein CbbQ -0.51
    6 GFF5185 FIG00732904: hypothetical protein -0.51
    7 GFF4766 identified by similarity to GB:AAK22812.1; match to protein family HMM PF06676 -0.51
    8 GFF3945 Phosphate transport regulator (distant homolog of PhoU) -0.50
    9 GFF6876 Aminotransferase, DegT/DnrJ/EryC1/StrS family -0.50
    10 GFF6878 hypothetical protein -0.49
    11 GFF5307 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.241) -0.49
    12 GFF5325 3-dehydroquinate synthase (EC 4.2.3.4) -0.49
    13 GFF6875 hypothetical protein -0.49
    14 GFF5150 Taurine ABC transporter, permease protein TauC -0.49
    15 GFF3889 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) -0.49
    16 GFF4090 Glutamate/aspartate ABC transporter, permease protein GltK (TC 3.A.1.3.4) -0.48
    17 GFF5668 Uncharacterized MFS-type transporter -0.48
    18 GFF1083 no description -0.48
    19 GFF3815 FIG00347597: hypothetical protein -0.48
    20 GFF6638 no description -0.48

    Or look for positive cofitness