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  • Negative cofitness for GFF2819 from Variovorax sp. SCN45

    Phosphoenolpyruvate synthase regulatory protein
    SEED: FIG137360: hypothetical protein
    KEGG: hypothetical protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6416 hypothetical protein -0.53
    2 GFF2802 DUF1176 domain-containing protein -0.52
    3 GFF6823 BUG/TctC family periplasmic protein -0.52
    4 GFF1327 Cell division protein BolA -0.51
    5 GFF121 Uncharacterized MFS-type transporter -0.50
    6 GFF1620 Large exoproteins involved in heme utilization or adhesion -0.47
    7 GFF4846 Conjugative transfer protein TrbE -0.47
    8 GFF4137 Methionine ABC transporter substrate-binding protein -0.46
    9 GFF5037 ABC transporter spermidine/putrescine-binding protein -0.46
    10 GFF3352 Branched-chain amino acid ABC transporter, ATP-binding protein LivG (TC 3.A.1.4.1) -0.44
    11 GFF331 Nucleoside ABC transporter, permease protein 2 -0.44
    12 GFF161 hypothetical protein -0.44
    13 GFF4588 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) -0.44
    14 GFF7058 Zinc-binding GTPase YciC -0.43
    15 GFF5536 no description -0.42
    16 GFF4065 Uncharacterized cysteine-rich DUF326 protein bsYhjQ/STM1261 -0.42
    17 GFF3454 Cys regulon transcriptional activator CysB -0.42
    18 GFF1501 hypothetical protein -0.41
    19 GFF5705 Transcriptional regulator, AcrR family -0.41
    20 GFF6282 23S rRNA (guanine(2445)-N(2))-methyltransferase (EC 2.1.1.173) -0.41

    Or look for positive cofitness