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  • Negative cofitness for PS417_01425 from Pseudomonas simiae WCS417

    AraC family transcriptional regulator
    SEED: transcriptional regulator, AraC family
    KEGG: AraC family transcriptional regulator

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_15365 diaminopimelate epimerase -0.20
    2 PS417_01710 histidine utilization repressor -0.18
    3 PS417_12760 histidine kinase -0.17
    4 PS417_17965 LysR family transcriptional regulator -0.17
    5 PS417_03430 methyltransferase type 11 -0.17
    6 PS417_11455 hypothetical protein -0.17
    7 PS417_27160 alkanesulfonate transporter permease subunit -0.17
    8 PS417_28155 ABC transporter substrate-binding protein -0.16
    9 PS417_16255 RNA polymerase sigma factor -0.16
    10 PS417_12365 cobalt chelatase -0.16
    11 PS417_26730 pyrroline-5-carboxylate reductase -0.16
    12 PS417_21210 amidotransferase -0.16
    13 PS417_04725 chemotaxis protein CheW -0.16
    14 PS417_16240 ABC transporter ATP-binding protein -0.15
    15 PS417_26035 glycine cleavage system protein R -0.15
    16 PS417_21310 AraC family transcriptional regulator -0.15
    17 PS417_25695 peroxiredoxin -0.15
    18 PS417_06655 class V aminotransferase -0.15
    19 PS417_11935 ABC transporter substrate-binding protein -0.15
    20 PS417_18585 3-isopropylmalate dehydrogenase -0.15

    Or look for positive cofitness