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  • Negative cofitness for GFF2789 from Variovorax sp. SCN45

    Peptidyl-tRNA hydrolase ArfB (EC 3.1.1.29)
    SEED: Hypothetical protein YaeJ with similarity to translation release factor
    KEGG: ribosome-associated protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF7391 hypothetical protein -0.51
    2 GFF2471 Outer membrane porin protein 32 precursor -0.50
    3 GFF5511 FIG000875: Thioredoxin domain-containing protein EC-YbbN -0.49
    4 GFF2685 DNA internalization-related competence protein ComEC/Rec2 -0.49
    5 GFF5795 esterase, PHB depolymerase family -0.48
    6 GFF1795 Hydantoin racemase (EC 5.1.99.5) -0.47
    7 GFF6592 hypothetical protein -0.47
    8 GFF1863 Uncharacterized MFS-type transporter -0.46
    9 GFF1978 putative membrane-associated phospholipid phosphatase, PAP2 superfamily -0.45
    10 GFF4134 Small molecule metabolism -0.45
    11 GFF5889 Uracil-DNA glycosylase, family 1 (EC 3.2.2.27) -0.45
    12 GFF6773 Transcriptional regulator, GntR family -0.45
    13 GFF2079 BUG/TctC family periplasmic protein -0.44
    14 GFF4304 Cyclohexanecarboxylate--CoA ligase -0.44
    15 GFF3592 hypothetical protein -0.44
    16 GFF5276 D-arabinitol 4-dehydrogenase (EC 1.1.1.11) -0.44
    17 GFF7411 no description -0.44
    18 GFF211 protein of unknown function UPF0125 -0.44
    19 GFF1216 Isoaspartyl aminopeptidase (EC 3.4.19.5) @ Asp-X dipeptidase -0.44
    20 GFF5116 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD -0.44

    Or look for positive cofitness