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  • Negative cofitness for GFF2787 from Variovorax sp. SCN45

    Transcriptional regulator PA1859, LysR family
    SEED: Transcriptional regulator, LysR family

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF740 Uncharacterized protein YdcJ -0.64
    2 GFF1577 hypothetical protein -0.63
    3 GFF2030 ABC-type branched-chain amino acid transport systems, periplasmic component -0.57
    4 GFF5608 Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent (EC 1.1.2.8) -0.53
    5 GFF634 Urea ABC transporter, permease protein UrtC -0.51
    6 GFF5796 no description -0.51
    7 GFF5844 Phospholipase A1 (EC 3.1.1.32) (EC 3.1.1.4) @ Outer membrane phospholipase A -0.51
    8 GFF2240 hypothetical protein -0.49
    9 GFF2124 Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, thiol-disulfide reductase involved in Cu(I) insertion into CoxII Cu(A) center -0.49
    10 GFF6723 Cysteine desulfurase (EC 2.8.1.7) -0.49
    11 GFF2699 4Fe-4S ferredoxin, iron-sulfur binding -0.49
    12 GFF730 Class A beta-lactamase (EC 3.5.2.6) -0.48
    13 GFF5925 no description -0.48
    14 GFF5589 Methionine aminopeptidase (EC 3.4.11.18) -0.48
    15 GFF879 BUG/TctC family periplasmic protein -0.48
    16 GFF4679 Inositol-1-monophosphatase (EC 3.1.3.25) -0.48
    17 GFF6818 hypothetical protein -0.48
    18 GFF680 RecA/RadA recombinase -0.47
    19 GFF609 hypothetical protein -0.47
    20 GFF2381 Ribonuclease PH (EC 2.7.7.56) -0.47

    Or look for positive cofitness