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  • Negative cofitness for GFF2741 from Variovorax sp. SCN45

    FIG002207: Probable transmembrane protein
    SEED: FIG002207: Probable transmembrane protein
    KEGG: lipoprotein-34

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF755 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB -0.60
    2 GFF2210 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly -0.55
    3 GFF2322 Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54) -0.54
    4 GFF3739 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) -0.54
    5 GFF287 hypothetical protein -0.53
    6 GFF4149 hypothetical protein -0.53
    7 GFF2379 Serine/threonine protein kinase -0.52
    8 GFF4485 FIG00715336: hypothetical protein -0.52
    9 GFF5412 no description -0.52
    10 GFF1975 hypothetical protein -0.52
    11 GFF586 Pirin -0.51
    12 GFF3307 FIG01161751: hypothetical protein -0.51
    13 GFF6813 no description -0.51
    14 GFF5321 Type IV pilus biogenesis protein PilO -0.50
    15 GFF5320 Type IV pilus biogenesis protein PilN -0.50
    16 GFF2194 Tol-Pal system peptidoglycan-associated lipoprotein PAL -0.50
    17 GFF183 Virulence protein -0.50
    18 GFF2509 Type IV fimbrial assembly protein PilC -0.50
    19 GFF2508 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) -0.49
    20 GFF2151 twitching motility protein PilG -0.49

    Or look for positive cofitness