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  • Negative cofitness for PS417_13975 from Pseudomonas simiae WCS417

    CdaR family transcriptional regulator
    SEED: Sugar diacid utilization regulator SdaR
    KEGG: carbohydrate diacid regulator

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_10900 ABC transporter substrate-binding protein -0.26
    2 PS417_03560 GTP-binding protein -0.23
    3 PS417_10905 hypothetical protein -0.23
    4 PS417_26760 oxidase -0.22
    5 PS417_10895 AMP-dependent synthetase -0.21
    6 PS417_03215 8-oxoguanine deaminase -0.19
    7 PS417_02105 acyl carrier protein -0.17
    8 PS417_12845 NAD(P)H dehydrogenase -0.17
    9 PS417_10910 FAD-dependent oxidoreductase -0.17
    10 PS417_03145 acetyl-CoA acetyltransferase -0.16
    11 PS417_08060 proline iminopeptidase -0.16
    12 PS417_14050 recombinase -0.16
    13 PS417_01335 hypothetical protein -0.16
    14 PS417_03140 3-ketoacyl-ACP reductase -0.16
    15 PS417_19160 hypothetical protein -0.16
    16 PS417_10550 DNA topoisomerase III -0.15
    17 PS417_01215 membrane protein -0.15
    18 PS417_13880 histidine kinase -0.15
    19 PS417_03485 type III secretion protein -0.15
    20 PS417_17750 hypothetical protein -0.15

    Or look for positive cofitness