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  • Negative cofitness for GFF274 from Variovorax sp. SCN45

    Probable RNA methyltransferase PA1839
    SEED: Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)
    KEGG: ribosomal RNA large subunit methyltransferase N

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6248 Site-specific recombinase -0.65
    2 GFF6194 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) -0.59
    3 GFF4187 hypothetical protein -0.58
    4 GFF4129 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) -0.56
    5 GFF4469 Cell division protein FtsA -0.56
    6 GFF3091 Septum-associated cell division protein DedD -0.55
    7 GFF5432 Glutathione S-transferase family protein -0.54
    8 GFF4085 Transcriptional regulator, LysR family -0.54
    9 GFF7152 no description -0.54
    10 GFF399 3'-to-5' exoribonuclease RNase R -0.53
    11 GFF1356 Putative manganese efflux pump MntP -0.53
    12 GFF1788 hypothetical protein -0.53
    13 GFF3075 Surface antigen -0.52
    14 GFF3397 Benzoate ABC transporter, substrate-binding protein -0.52
    15 GFF5078 Uncharacterized protein CbuG_0353 -0.51
    16 GFF370 23S rRNA (uridine(2552)-2'-O)-methyltransferase (EC 2.1.1.166) -0.51
    17 GFF3451 no description -0.51
    18 GFF2122 Type IV pilus biogenesis protein PilE -0.50
    19 GFF7291 Magnesium and cobalt transport protein CorA -0.50
    20 GFF424 Cobalamin synthase (EC 2.7.8.26) -0.50

    Or look for positive cofitness