Negative cofitness for GFF2721 from Variovorax sp. SCN45

ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines)
SEED: polar amino acid ABC transporter, inner membrane subunit
KEGG: polar amino acid transport system permease protein

Computing cofitness values with 61 experiments...

Genes with the strongest negative cofitness:

Rank Hit Name Description Cofit  
1 GFF4906 hypothetical protein -0.55
2 GFF4209 no description -0.52
3 GFF153 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) -0.50
4 GFF5226 Probable cytochrome c2 -0.49
5 GFF2267 Integral membrane protein -0.48
6 GFF668 Transcriptional regulator, LysR family -0.46
7 GFF6801 Transcriptional regulator, GntR family -0.46
8 GFF3608 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) -0.46
9 GFF4737 Nitrate ABC transporter, substrate-binding protein -0.45
10 GFF1148 hypothetical protein -0.45
11 GFF7132 Xylose isomerase-like TIM-barrel protein KPN_00539 -0.44
12 GFF1823 Mg(2+)-transport-ATPase-associated protein MgtC -0.43
13 GFF2501 O-antigen acetylase -0.43
14 GFF3937 Transcriptional regulator, AraC family -0.43
15 GFF5781 Transcriptional regulator, LysR family -0.42
16 GFF5421 Peptidase M48, Ste24p precursor -0.42
17 GFF5587 Acetoin dehydrogenase E1 component alpha-subunit (EC 2.3.1.190) -0.41
18 GFF1363 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) -0.41
19 GFF3984 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) -0.41
20 GFF6859 Two-component transcriptional response regulator, OmpR family -0.41

Or look for positive cofitness