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  • Negative cofitness for GFF27 from Variovorax sp. SCN45

    4-hydroxybenzoyl-CoA thioesterase family active site
    SEED: 4-hydroxybenzoyl-CoA thioesterase family active site

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3847 LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24) -0.57
    2 GFF2551 Endonuclease/exonuclease/phosphatase -0.54
    3 GFF5046 putative lipoprotein -0.54
    4 GFF838 hypothetical protein -0.54
    5 GFF2395 D-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.-) -0.53
    6 GFF506 hypothetical protein -0.53
    7 GFF627 Secretion protein HlyD -0.51
    8 GFF6997 Flagellar basal-body rod protein FlgC -0.50
    9 GFF5815 Uncharacterized MFS-type transporter -0.50
    10 GFF2856 Transcriptional regulator, LysR family -0.50
    11 GFF6479 hypothetical protein -0.48
    12 GFF6575 Conjugative transfer protein TrbJ -0.47
    13 GFF2091 Cobalt/zinc/cadmium resistance protein CzcD -0.47
    14 GFF2250 Putative stomatin/prohibitin-family membrane protease subunit aq_911 -0.47
    15 GFF4197 Transcriptional regulator, LysR family -0.47
    16 GFF3338 Threonine efflux protein -0.46
    17 GFF6721 Transcriptional regulator, LysR family -0.46
    18 GFF3192 hypothetical protein -0.46
    19 GFF5397 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) -0.46
    20 GFF6354 T6SS component TssK (ImpJ/VasE) -0.46

    Or look for positive cofitness