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  • Negative cofitness for PS417_13650 from Pseudomonas simiae WCS417

    LacI family transcriptional regulator
    SEED: Ribose operon repressor
    KEGG: LacI family transcriptional regulator

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_16005 ATPase -0.26
    2 PS417_06615 ABC transporter for branched-chain amino acids, substrate-binding component (from data) -0.24
    3 PS417_22690 phosphogluconate dehydratase -0.23
    4 PS417_09965 hypothetical protein -0.22
    5 PS417_12855 3-phosphoshikimate 1-carboxyvinyltransferase -0.22
    6 PS417_12555 phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) (from data) -0.21
    7 PS417_10690 acyl-CoA synthetase -0.21
    8 PS417_03975 FruA -0.20
    9 PS417_10200 hypothetical protein -0.20
    10 PS417_18400 D-ribose ABC transporter, ATPase component RbsA (from data) -0.20
    11 PS417_25270 NrdR family transcriptional regulator -0.20
    12 PS417_13360 GCN5 family acetyltransferase -0.20
    13 PS417_20125 phosphoribosylglycinamide formyltransferase -0.19
    14 PS417_03310 carbonate dehydratase -0.19
    15 PS417_00690 hypothetical protein -0.19
    16 PS417_04065 peptide ABC transporter substrate-binding protein -0.19
    17 PS417_00210 hypothetical protein -0.19
    18 PS417_08200 hypothetical protein -0.19
    19 PS417_27040 3-phosphoglycerate dehydrogenase -0.18
    20 PS417_20925 nucleotide cyclase -0.18

    Or look for positive cofitness