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  • Negative cofitness for GFF2671 from Variovorax sp. SCN45

    Domain of unknown function / Efflux ABC transporter, permease protein
    SEED: ABC transporter, permease component
    KEGG: antibiotic transport system permease protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3539 Probable ALANIN-rich signal peptide protein -0.53
    2 GFF308 Oxidoreductase, short-chain dehydrogenase/reductase family -0.53
    3 GFF193 Two-component sensor PilS -0.53
    4 GFF1655 no description -0.51
    5 GFF2528 ABC transporter, ATP-binding protein PA3838 -0.50
    6 GFF6408 Urocanate hydratase (EC 4.2.1.49) -0.49
    7 GFF5581 SSU ribosomal protein S5p (S2e) -0.47
    8 GFF563 Type IV fimbrial biogenesis protein PilY1 -0.47
    9 GFF3663 Permease of the drug/metabolite transporter (DMT) superfamily -0.47
    10 GFF7378 protein of unknown function DUF1311 -0.47
    11 GFF1909 FIG00537389: hypothetical protein -0.47
    12 GFF6839 hypothetical protein -0.46
    13 GFF5457 L-threonate dehydrogenase (NAD+) -0.46
    14 GFF6874 hypothetical protein -0.46
    15 GFF3843 Uncharacterized MFS-type transporter -0.45
    16 GFF3262 Polymer-forming bactofilin -0.45
    17 GFF4272 BUG/TctC family periplasmic protein -0.45
    18 GFF3477 Phosphoprotein phosphatase -0.44
    19 GFF4884 UPF0380 proteins YafZ and homologs -0.44
    20 GFF5293 N-carbamoyl-L-amino acid hydrolase (EC 3.5.1.87) -0.44

    Or look for positive cofitness