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  • Negative cofitness for GFF2665 from Variovorax sp. SCN45

    FIG001454: Transglutaminase-like enzymes, putative cysteine proteases
    SEED: FIG001454: Transglutaminase-like enzymes, putative cysteine proteases

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF5366 L-Proline/Glycine betaine transporter ProP -0.64
    2 GFF2410 Intracellular protease -0.62
    3 GFF6566 hypothetical protein -0.58
    4 GFF494 RND efflux system, membrane fusion protein -0.58
    5 GFF4906 hypothetical protein -0.56
    6 GFF6146 Phosphonoacetate hydrolase (EC 3.11.1.2) -0.56
    7 GFF153 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) -0.55
    8 GFF2642 Enoyl-CoA hydratase (EC 4.2.1.17) -0.55
    9 GFF1317 no description -0.54
    10 GFF3748 KEGG: dihydrodipicolinate synthase -0.54
    11 GFF6392 hypothetical protein -0.52
    12 GFF482 Glycine betaine/L-proline transport substrate-binding protein ProX (TC 3.A.1.12.1) -0.52
    13 GFF3771 no description -0.52
    14 GFF240 Cytosol aminopeptidase PepA (EC 3.4.11.1) -0.51
    15 GFF3304 Monofunctional biosynthetic peptidoglycan transglycosylase -0.51
    16 GFF6220 hypothetical protein -0.51
    17 GFF4409 Aldehyde dehydrogenase (EC 1.2.1.3) -0.51
    18 GFF165 Chromate transport protein ChrA -0.50
    19 GFF5519 Transcriptional regulator -0.50
    20 GFF1660 Type IV fimbrial biogenesis protein PilY1 -0.49

    Or look for positive cofitness